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Bash

NGS related nodes for KNIME Workbench version 0.2.200.qualifier by Bernd Jagla, Institute Pasteur

executes a command in a given directory.

Under Windows XP (possibly others as well) use of the program cmd.exe is recommended. E.g. to run the dir command, one would use the following text in "Bash command": cmd /c dir. More information on cmd can be found here: http://www.microsoft.com/resources/documentation/windows/xp/all/proddocs/en-us/cmd.mspx?mfr=true

Options

short name of first option (like in the dialog)
description of first option
short name of second option (like in the dialog)
description of second option

Output Ports

Icon
Standard output
Icon
Standard error

Best Friends (Incoming)

Best Friends (Outgoing)

Workflows

Installation

To use this node in KNIME, install KNIME NGS tools from the following update site:

KNIME 4.3

A zipped version of the software site can be downloaded here.

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Developers

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