tools

NGS related tools

This category contains 12 nodes.

Bash 

Run a BASH command in a given directory and output the result in a table one line = one cell * none line = one row.

CmdwInput 

execute command using input as command-line and path information

CollectionLinePlot 

Create an in-table SVG graphics for a numerical collection column

CountSorted 

count list of sorted values.

FQCRow2Table 

Creates a table from the first row

IGVview 

Links to an IGV installation. * nInput hostname and port, chr name, start and stop position

JoinSorted 

Simple, but fast join of two tables based on two columns.

NGSconcat 

concats 2 tables

Table2FQCrow 

Convert a table to a FQC entry