This category is currently not available in KNIME v5.2 — instead we’re showing this page for KNIME v4.6. You can use the version menu in the title bar to permanently switch your preferred version. This will also show the link to the update site.
tools
NGS related tools
This category contains 11 nodes.
Bash
Run a BASH command in a given directory and output the result in a table one line = one cell * none line = one row.
CmdwInput
execute command using input as command-line and path information
CollectionLinePlot
Create an in-table SVG graphics for a numerical collection column
FQCRow2Table
Creates a table from the first row
JoinSorted
Simple, but fast join of two tables based on two columns.
NGSconcat
concats 2 tables
Seq2PosIncidents Deprecated
takes the sequences from a column and its directionality from a different collumn, the chromosome and its position and then creates rows for each base. * […]
Table2FQCrow
Convert a table to a FQC entry
TableSpecs
calculate simple table/column stats