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PositionStr2Position

DeprecatedNGS related nodes for KNIME Workbench version 0.2.200.qualifier by Bernd Jagla, Institute Pasteur

This node converts a position string (usually derived from NGS alignments) of the form >chr1_1234 into the chromosome name chr1 and the position 1234 in two additional columns.

Options

column name
column name with [>]?chr.*_[0-9]*

Input Ports

Icon
table with chromosome location string

Output Ports

Icon
table with two additional columns

Best Friends (Incoming)

Installation

To use this node in KNIME, install KNIME NGS tools from the following update site:

KNIME 4.2
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