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FastQWriter

Writes in FASTQ formatted files

This implementation uses the Biojava implementation for writing the data. The "+" line is left empty.

Options

Sequence File: name of output file. will be overwritten if exists without warning
Sequence: Column with sequences
Quality: Column with quality information
Description/ID: Column with read ID

Input Ports

: input table needs string columns

Output Ports

This node has no output ports

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Installation

To use this node in KNIME, install the extension KNIME NGS tools from the below update site following our NodePit Product and Node Installation Guide:

v4.6

A zipped version of the software site can be downloaded here.

Plugin provider: Bernd Jagla, Institute Pasteur

Plugin version: 0.2.300.qualifier

On NodePit since: 2022-06-11

Last update: 2024-04-18

KNIME versions: From v3.6 to v4.6

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