NGS related I/O
This category contains 9 nodes.
writes bedGraph file based on chromosome, position value and offset
Reads a FASTA, Genbank, uniport, embl, or INSDseq files into two columns: seq_name and sequence plus annotations
Reads in FASTQ formatted files
writes FASTQ formatted data
Reads files such as the fastqc_data.txt file. Sections are stored in cells.
Writes a text file similar to the data file from FASTQC
This nodes reads a genbank file and retrieves the features that can be extracted from that file.
Reads a roi file: * ntab delimited file * n1st column chromosome name * n2nd col: start position * n3rd col: stop position * nn column (must be the […]
reads SAM/BAM files
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