IDExtractor

Extracts 'n' peptides randomly or best 'n' from idXML files.

Web Documentation for IDExtractor

Options

version
Version of the tool that generated this parameters file.
number_of_peptides
Number of randomly chosen peptides
number_of_rand_invokations
Number of rand invocations before random draw (basically a seed)
best_hits
If this flag is set the best n peptides are chosen.
log
Name of log file (created only when specified)
debug
Sets the debug level
threads
Sets the number of threads allowed to be used by the TOPP tool
no_progress
Disables progress logging to command line
force
Overrides tool-specific checks
test
Enables the test mode (needed for internal use only)

Input Ports

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input file [idXML]

Output Ports

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output file [idXML]

Views

IDExtractor Std Output
The text sent to standard out during the execution of IDExtractor.
IDExtractor Error Output
The text sent to standard error during the execution of IDExtractor. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

Workflows

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Links

Developers

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