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Installation 1-2

Installation Script and Checking

The Setup Diagnosis node reports possible problems in the plugin installation and set-up. KNIME_batch.py script is run to install KNIME features and update Schrodinger extensions in an existing or new KNIME installation.

Installation Script and Checking: The Setup Diagnosis node reports possible problems in the plugin installation and set-up. KNIME_batch.py script is run to install KNIME features and update Schrodinger extensions in an existing or newKNIME installation. The Schrodinger zipped update site and KNIME installers have to be downloaded first because the corresponding update sites arepassword protected or require Terms and Conditions agreement. "$SCHRODINGER/run" -FROM knime KNIME_install.py -verbose -features_list "$SCHRODINGER/knime-v*/data/full_free_features.lst""$SCHRODINGER/knime-v*/bin/*/knime/" The nodes can be installed from a corporate updated site (or zipped version) by adding it to the -updatesitecomma separate list. See the Lilly nodes available from http://tech.knime.org/update/community-contributions/2.7/.KNIME installer is available on: http://www.knime.org/knime-analytics-platform-sdk-downloadAnd the Schrodinger extensions on:https://support.schrodinger.com/releases/knime/zippedUpdateSiteand along with the Suite installers from: http://www.schrodinger.com/downloadcenter/Installation checking[to be configured]Current Schrodinger installation,Schrodinger update siteFeature list:community plugins Add some community nodesand upgrade the Schrodinger extensionsInstalled plugins.New installation location to be renamed before closing the KNIME test instanceand the Chemistry external tool node up.See verbose log in the Chemistry external tool node View.Feature list:All KNIME & extensionsand Labs extensions(except Text processing)Marvin chemistry extensionsVernalis, RDKitand Lilly's nodes[to be configured]KNIME Fresh installSchrodinger extensions from the zipped update site+update site with Lilly's nodesInstalled plugins.New installation location to be renamed before closing the KNIME test instanceand the Chemistry external tool node up.See verbose log in the Chemistry external tool node View.Add the Schrodinger extensions,some community nodesand KNIME featuresto a stand-alone KNIME installationSee other available options The script can also be downloaded from in KNIME_install.py help messageAdd all the trusted community nodesto the running installation$SCHRODINGER/knime-v*/data/full_free_features.lstTrusted community featuresClose and reopen KNIMEto use the new nodesDiagnosis results are also written to a file in the temporary directory Setup Diagnosis Table Viewer Configuration Table Creator ChemistryExternal Tool Table Viewer Table Creator Configuration Table Viewer ChemistryExternal Tool ChemistryExternal Tool Table Viewer ChemistryExternal Tool CSV Reader Table Viewer Table Viewer Table Rowto Variable Installation Script and Checking: The Setup Diagnosis node reports possible problems in the plugin installation and set-up. KNIME_batch.py script is run to install KNIME features and update Schrodinger extensions in an existing or newKNIME installation. The Schrodinger zipped update site and KNIME installers have to be downloaded first because the corresponding update sites arepassword protected or require Terms and Conditions agreement. "$SCHRODINGER/run" -FROM knime KNIME_install.py -verbose -features_list "$SCHRODINGER/knime-v*/data/full_free_features.lst""$SCHRODINGER/knime-v*/bin/*/knime/" The nodes can be installed from a corporate updated site (or zipped version) by adding it to the -updatesitecomma separate list. See the Lilly nodes available from http://tech.knime.org/update/community-contributions/2.7/.KNIME installer is available on: http://www.knime.org/knime-analytics-platform-sdk-downloadAnd the Schrodinger extensions on:https://support.schrodinger.com/releases/knime/zippedUpdateSiteand along with the Suite installers from: http://www.schrodinger.com/downloadcenter/Installation checking[to be configured]Current Schrodinger installation,Schrodinger update siteFeature list:community pluginsAdd some community nodesand upgrade the Schrodinger extensionsInstalled plugins.New installation location to be renamed before closing the KNIME test instanceand the Chemistry external tool node up.See verbose log in the Chemistry external tool node View.Feature list:All KNIME & extensionsand Labs extensions(except Text processing)Marvin chemistry extensionsVernalis, RDKitand Lilly's nodes[to be configured]KNIME Fresh installSchrodinger extensions from the zipped update site+update site with Lilly's nodesInstalled plugins.New installation location to be renamed before closing the KNIME test instanceand the Chemistry external tool node up.See verbose log in the Chemistry external tool node View.Add the Schrodinger extensions,some community nodesand KNIME featuresto a stand-alone KNIME installationSee other available options The script can also be downloaded from in KNIME_install.py help messageAdd all the trusted community nodesto the running installation$SCHRODINGER/knime-v*/data/full_free_features.lstTrusted community featuresClose and reopen KNIMEto use the new nodesDiagnosis results are also written to a file in the temporary directory Setup Diagnosis Table Viewer Configuration Table Creator ChemistryExternal Tool Table Viewer Table Creator Configuration Table Viewer ChemistryExternal Tool ChemistryExternal Tool Table Viewer ChemistryExternal Tool CSV Reader Table Viewer Table Viewer Table Rowto Variable

Nodes

Extensions

Links

Download

To use this workflow in KNIME, download it from the below URL and open it in KNIME:

Download Workflow
Created by: jcmozzic
Created at: 2014-07-28
On NodePit since: 2020-08-12
Last update: 2024-11-18
Created with KNIME version: v4.1.3
Tags: ToolsInstallation

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