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GPCRDB Structure-ligand interactions

Retrieves interactions of a protein with its ligands from GPCRDB

Options

Advanced Options

Base path: Url to use as base path for GPCRDB webservice
Timeout: Timeout in seconds to wait for GPCRDB webservice response

Input Ports

: Table with PDB structure identifiers

Output Ports

: GPCRDB Structure-ligand interactions

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Installation

To use this node in KNIME, install the extension 3D-e-Chem KNIME nodes from the below update site following our NodePit Product and Node Installation Guide:

v5.2

A zipped version of the software site can be downloaded here.

Plugin provider: Netherlands eScience Center

Plugin version: 1.4.3.v202311211210

On NodePit since: 2023-12-06

Last update: 2024-11-13

KNIME versions: v5.3, v5.2, v5.1, v4.7, v4.6, v4.5, v4.4, v4.3, v4.2, v4.1, v4.0, v3.7, v3.6

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