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BS-Seq Analysis Workflow

3-letter Mapping SNP and Methylation Level Calling 4-letter Alignment Alphabet Reduction CallingC -> TG -> AC -> TG -> ABackwardStrandLocal pairwise realignmentOUTPUT: SNPsOUTPUT:Methylation LevelsForwardStrandINPUT: Right Reads INPUT: Left ReadsINPUT: Reference FileMerger FileMerger FileMerger Casbar Four2three Four2three Four2three Four2three Razers3 Bisar File Viewer File Viewer Razers3 Sort by Position Sort by Name Input File Input File Input File 3-letter Mapping SNP and Methylation Level Calling 4-letter Alignment Alphabet Reduction CallingC -> TG -> AC -> TG -> ABackwardStrandLocal pairwise realignmentOUTPUT: SNPsOUTPUT:Methylation LevelsForwardStrandINPUT: Right Reads INPUT: Left ReadsINPUT: Reference FileMerger FileMerger FileMerger Casbar Four2three Four2three Four2three Four2three Razers3 Bisar File Viewer File Viewer Razers3 Sort by Position Sort by Name Input File Input File Input File

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To use this workflow in KNIME, download it from the below URL and open it in KNIME:

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Created by: sabrina7
Created at: 2014-04-30
On NodePit since: 2018-06-16
Last update: 2025-01-20
Created with KNIME version: v3.1.1

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