Icon

basic_​peptide_​identification

Spectrum Files (.mzML)for each input fileNode 4Protein Database (.fasta)search enginemapping to proteinsPSM-level FDRrescore and calculatePEPextract score featuresfor score recalibrationNode 90Node 93Node 94Input Files ZipLoopStart ZipLoopEnd Input File XTandemAdapter PeptideIndexer FalseDiscoveryRate PercolatorAdapter PSMFeatureExtractor FileInfo Output Folder Output Folder Spectrum Files (.mzML)for each input fileNode 4Protein Database (.fasta)search enginemapping to proteinsPSM-level FDRrescore and calculatePEPextract score featuresfor score recalibrationNode 90Node 93Node 94Input Files ZipLoopStart ZipLoopEnd Input File XTandemAdapter PeptideIndexer FalseDiscoveryRate PercolatorAdapter PSMFeatureExtractor FileInfo Output Folder Output Folder

Nodes

Extensions

Links

Download

To use this workflow in KNIME, download it from the below URL and open it in KNIME:

Download Workflow
Created by: walzer
Created at: 2014-08-25
On NodePit since: 2021-09-07
Last update: 2024-11-21
Created with KNIME version: v4.4.1

Deploy, schedule, execute, and monitor your KNIME workflows locally, in the cloud or on-premises – with our brand new NodePit Runner.

Try NodePit Runner!