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LCMS Introduction

Liquid chromatography-coupled mass-spectrometry introduction

Load mass spectra, process (e.g. filter) them "in-file", then convert them to tables, and visualize them.

This workflow demonstrates basic loading, processing, converting and visualizing mass-spectrometry experiments (in mzML format). For more information see the workflow metadata. Find it here: View -> Description If using own data, you can configure the nodeand set the path. Example data is stored in theworkflow data path and referenced already. Caution: The 3D View shouldmainly be used for checkingfiltered data or interesting areas/excerpts. Load mzMLsome filteringof peaksto KNIME table3D View Input File BaselineFilter FileToTable MS Map Viewer This workflow demonstrates basic loading, processing, converting and visualizing mass-spectrometry experiments (in mzML format). For more information see the workflow metadata. Find it here: View -> Description If using own data, you can configure the nodeand set the path. Example data is stored in theworkflow data path and referenced already. Caution: The 3D View shouldmainly be used for checkingfiltered data or interesting areas/excerpts. Load mzMLsome filteringof peaksto KNIME table3D ViewInput File BaselineFilter FileToTable MS Map Viewer

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To use this workflow in KNIME, download it from the below URL and open it in KNIME:

Download Workflow
Created by: pfeuffer
Created at: 2021-03-22
On NodePit since: 2021-10-20
Last update: 2024-11-21
Created with KNIME version: v4.4.1
Tags: mass spectrometryOpenMSvisualizationintroduction

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