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Run PyMOL 1-2

Run PyMOL:

[Version: 6.8
Requires: Maestro, PyMOL
Keywords: PyMOL, visualization]

Run PyMOL:Display structure in PyMOL. Run PyMOL commands and save the modified structures. Raytrace views and save the images.[Version: 2.7.8] [Requires: Maestro, PyMOL] [Keywords: PyMOL, visualization]Some ligandsProtein-ligandcomplexesSelect ligandsand renderingRaytrace andsave the images Raytraced images[Vernalis node,can be skipped]Ligands Alignmol2 fileAligned structuresMaestro mouse configurationRendering Molecule Reader(to MAE) Get PDB Run PyMOL Run PyMOL Loop End Chunk Loop Start Load image Table Viewer MISSING PDBProperty Extractor Table Viewer Load outputstructures Image to Report Load image Run PyMOL Java EditVariable (simple) Run Maestro Run PyMOL Mol2 Reader Run PyMOL:Display structure in PyMOL. Run PyMOL commands and save the modified structures. Raytrace views and save the images.[Version: 2.7.8] [Requires: Maestro, PyMOL] [Keywords: PyMOL, visualization]Some ligandsProtein-ligandcomplexesSelect ligandsand renderingRaytrace andsave the images Raytraced images[Vernalis node,can be skipped]Ligands Alignmol2 fileAligned structuresMaestro mouse configurationRenderingMolecule Reader(to MAE) Get PDB Run PyMOL Run PyMOL Loop End Chunk Loop Start Load image Table Viewer MISSING PDBProperty Extractor Table Viewer Load outputstructures Image to Report Load image Run PyMOL Java EditVariable (simple) Run Maestro Run PyMOL Mol2 Reader

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To use this workflow in KNIME, download it from the below URL and open it in KNIME:

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On NodePit since: 2019-10-15
Last update: 2020-02-26
Created with KNIME version: v3.5.3

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