DTAExtractor

Extracts spectra of an MS run file to several files in DTA format.

Web Documentation for DTAExtractor

Options

version
Version of the tool that generated this parameters file.
out
base name of DTA output files (RT, m/z and extension are appended)
mz
m/z range of precursor peaks to extract. This option is ignored for MS level 1
rt
retention time range of spectra to extract
level
MS levels to extract
log
Name of log file (created only when specified)
debug
Sets the debug level
threads
Sets the number of threads allowed to be used by the TOPP tool
no_progress
Disables progress logging to command line
force
Overrides tool-specific checks
test
Enables the test mode (needed for internal use only)

Input Ports

Icon
input file [mzML]

Output Ports

This node has no output ports

Popular Successors

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Views

DTAExtractor Std Output
The text sent to standard out during the execution of DTAExtractor.
DTAExtractor Error Output
The text sent to standard error during the execution of DTAExtractor. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

Workflows

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Further Links

Developers

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