Load Local XML Files

Each XML file is loaded into into a new table cell (1 file per row). Only files of with extensions xml, pdbml, pdbxml and pdbx are currently recognised.

Options

Select files

Use the 'Browse...' and 'Add from history' buttons to add all the files to be included in the table. Alternatively, a flow variable can be specified, containing one or more filenames separated by ';'. The latest added file(s) will be selected. If no files are highlighted in the 'Selected files' box, then the 'Browse...' button opens a new file browser window in the default location; otherwise, the file browser opens in the last highlighted file's location.

Select file encoding

Select the file encoding. 'Guess' will attempt to assign it based on the connectin property of the URL, the content-type, and the Byte-Order Mark (BOM). UTF-8 will be used if no other encoding is identified

Include paths in output table

Include the full file path and URLs as columns in the output table

Include filename in Row IDs

The filename will be included in the Row ID (duplicated will be suffixed with '_n', where n is an index starting at 0). Otherwise, the Row IDs will be in the format 'Row_n', with an an index starting at 0

Include filenames in output table

Include the filename as a column in the output table

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Links

• FASTA Sequence Extractor Stalls Out Indefinitely at 99%by s.roughley on 2018-11-07

  forum.knime.com/p/49685

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