Sequence Converter

Converts sequence formats.
Runs utilities/seqconvert

Options

Read an alignment in the input file
Use ATOM (not SEQRES) records with PDB files
Start : read from this sequence in the input file: Reads from this sequence in the input file
End : read to (and including) this sequence in the input file: Reads to (and including) this sequence in the input file
Total : read at most this number of sequences: Reads maximum this number of sequnces
Input: Input file format
Output: Output file format

: Input in native (Schrödinger), FASTA , PDB, NBRF-PIR, TEXT-PLAIN, GCG, SWISS-PROT, GENBANK, NCBI, PHYLIP, NEXUS-PAUP, SELEX, STADEN, PFAM-STOCKHOLM, CASP format.

: Output in native (Schrödinger), FASTA, NBRF-PIR, TEXT-PLAIN, GCG format, SWISS-PROT, CASP, GENBANK format