com.genericworkflownodes.knime.base.data.port.AbstractFileStoreURIPortObject

Runs a Bayesian protein inference.

Estimates the false discovery rate on peptide and protein level using decoy searches.

Resolves ambiguous annotations of features with peptide identifications

Estimates peptide probabilities using a decoy search strategy. WARNING: This util is deprecated.

Extracts 'n' peptides randomly or best 'n' from idXML files.

Assigns protein/peptide identifications to features or consensus features.

Calculates a distribution of the mass error from given mass spectra and IDs.

Estimates probabilities for incorrectly assigned peptide sequences and a set of search engine scores using a mixture model.

Switches between different scores of peptide or protein hits in identification data

Computes extra features for each input PSM.

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