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Sugar Remover

KNIME CDK Integration version 1.5.700.v202006231106 by KNIME GmbH, Konstanz and EMBL-EBI, Cambridge

This node removes all the sugars present in the structure of a compound. The sugar can be terminal or connect other substructures and in that case, all the substructures with more than 5 bonds are kept.

Options

Molecule column
Select the column containing the molecular structure.
Append Column
Appends a new molecule column (with the name as specified in the text field) if checked, replaces the original column otherwise.

Input Ports

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Table containing molecular structures

Output Ports

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As input but with structure without sugars

Best Friends (Incoming)

Best Friends (Outgoing)

Installation

To use this node in KNIME, install KNIME-CDK from the following update site:

KNIME 4.2

A zipped version of the software site can be downloaded here.

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Developers

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