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GPCRDB Protein similarity

GPCRDB Nodes version 1.4.2.v202004060755 by Netherlands eScience Center

Get similarity of query against subjects

Options

Advanced Options

Chunk size
Number of subjects fetched within a single webservice fetch, If nr of subjects is greater than chunk size then multiple requests will be made.
Base path
Url to use as base path for GPCRDB webservice
Timeout
Timeout in seconds to wait for GPCRDB webservice response

Input Ports

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Table with Uniprot identifier as queries
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Table with Uniprot identifier as subjects

Output Ports

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GPCRDB protein similarity pairs

Best Friends (Incoming)

Best Friends (Outgoing)

Installation

To use this node in KNIME, install 3D-e-Chem KNIME nodes from the following update site:

KNIME 4.4

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Developers

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