This node is currently not available in KNIME v5.4 — instead we’re showing this page for KNIME v4.7. You can use the version menu in the title bar to permanently switch your preferred version. This will also show the link to the update site.

Search

Web Documentation for Search

Options

version-check: Turn this option off to disable version update notifications of the application.
threads: Specify the number of threads to use.
input-type: Specify the type of input.
huge: Required if the db contains more than 16M entries.
output-file: Specify an output file.
online: Perform online search.
seed-length: Minimum seed length.
no-wait: Do not wait for query file.

Input Ports

: []
: []

Output Ports

This node has no output ports

Popular Predecessors

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Popular Successors

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Views

Search Std Output: The text sent to standard out during the execution of Search.
Search Error Output: The text sent to standard error during the execution of Search. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

Workflows

No workflows found

Developers

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Installation

To use this node in KNIME, install the extension SeqAn from the below update site following our NodePit Product and Node Installation Guide:

v4.7

A zipped version of the software site can be downloaded here.

Plugin provider: Freie Universitaet Berlin, Universitaet Tuebingen, and the SeqAn Team

Plugin version: 2.4.1.202004061533

On NodePit since: 2022-12-06

Last update: 2024-12-16

KNIME versions: From v3.6 to v4.7

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