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MzMLSplitter

Generic Workflow Nodes for KNIME: OpenMS version 2.4.0.201810261314 by Freie Universitaet Berlin, Universitaet Tuebingen, and the OpenMS Team

Splits an mzML file into multiple parts

Web Documentation for MzMLSplitter

Options

version
Version of the tool that generated this parameters file.
out
Prefix for output files ('_part1of2.mzML' etc. will be appended; default: same as 'in' without the file extension)
parts
Number of parts to split into (takes precedence over 'size' if set)
size
Approximate upper limit for resulting file sizes (in 'unit')
unit
Unit for 'size' (base 1024)
no_chrom
Remove chromatograms, keep only spectra.
no_spec
Remove spectra, keep only chromatograms.
log
Name of log file (created only when specified)
debug
Sets the debug level
threads
Sets the number of threads allowed to be used by the TOPP tool
no_progress
Disables progress logging to command line
force
Overwrite tool specific checks.
test
Enables the test mode (needed for internal use only)

Input Ports

Input file [mzML]

Views

MzMLSplitter Std Output
The text sent to standard out during the execution of MzMLSplitter.
MzMLSplitter Error Output
The text sent to standard error during the execution of MzMLSplitter. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

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Update Site

To use this node in KNIME, install Generic Workflow Nodes for KNIME: OpenMS from the following update site:

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