IDRipper

Split protein/peptide identification file into several files according to annotated file origin.

Options

version: Version of the tool that generated this parameters file.
out_path: Directory for the output files after ripping according to 'file_origin'. If 'out_path' is set, 'out' is ignored.
log: Name of log file (created only when specified)
debug: Sets the debug level
threads: Sets the number of threads allowed to be used by the TOPP tool
no_progress: Disables progress logging to command line
force: Overrides tool-specific checks
test: Enables the test mode (needed for internal use only)

: Input file, in which the protein/peptide identifications must be tagged with 'file_origin' [idXML]

IDRipper Std Output: The text sent to standard out during the execution of IDRipper.
IDRipper Error Output: The text sent to standard error during the execution of IDRipper. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

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To use this node in KNIME, install the extension OpenMS from the below update site following our NodePit Product and Node Installation Guide:

v4.7

A zipped version of the software site can be downloaded here.

Plugin provider: Freie Universitaet Berlin, Universitaet Tuebingen, and the OpenMS Team

Plugin version: 2.7.0.202109131426

On NodePit since: 2022-12-06

Last update: 2023-06-04

KNIME versions: Since v3.6