HCS-Tools for KNIME version 4.0.0.v202007151505 by Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG)
This nodes takes a string column and appends the information content of the barcode string into several new columns (e.g. library code, library plate number, project code, assay, date, replicate).
The node uses a regular expression that tries to match the barcode column. Possible barcode patterns can be set at:
|Extracted metadata columns|
|Barcodes from input column||library plate number||project code||date||replicate||library code||assay|
Each wanted meta information is marked as a named group and results in a new column.Definition pattern:
|group name||column name|
|libplatenumber||library plate number|
|concunit||unit of concentration|
To use this node in KNIME, install KNIME HCS Tools from the following update site:
A zipped version of the software site can be downloaded here.
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