Targeted Experiments

/community/OpenMS/Targeted Experiments

This category contains 14 nodes.

InclusionExclusionListCreator 

Creates inclusion and/or exclusion lists.

MRMMapper 

MRMMapper maps measured chromatograms (mzML) and the transitions used (TraML)

OpenSwathAnalyzer 

Picks peaks and finds features in an SWATH-MS or SRM experiment.

OpenSwathAssayGenerator 

Generates assays according to different models for a specific TraML

OpenSwathChromatogramExtractor 

Extract chromatograms (XIC) from a MS2 map file.

OpenSwathConfidenceScoring 

Compute confidence scores for OpenSwath results

OpenSwathDecoyGenerator 

Generates decoys according to different models for a specific TraML

OpenSwathDIAPreScoring 

Scoring spectra using the DIA scores.

OpenSwathFeatureXMLToTSV 

Converts a featureXML to a mProphet tsv.

OpenSwathFileSplitter 

Splits SWATH files into n files, each containing one window.