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Cell Image Segmentation with Neural Networks

Cell Segmentation with Neural Networks
Example workflow illustrating the use of the 'Cell Segmentation with Cellpose' node.DISCLAIMER:In order to use this workflow, you need to manually install the "KNIME Image Processing - PythonExtensions" available at kni.me/e/CjujPH_iaJn-CwNlThe author of this workflow is not affiliated with the authors of Cellpose, nor with KNIME. Please refer to theoriginal Cellpose paper for information about Cellpose, and to the image.sc forum for questions.Reference:Stringer, C., Wang, T., Michaelos, M. et al. Cellpose: a generalist algorithm for cellular segmentation. NatMethods 18, 100–106 (2021). https://doi.org/10.1038/s41592-020-01018-x Node 1Node 2Node 3 Cell Segmentationwith Cellpose Table Creator Image Reader(Table) Image Viewer Example workflow illustrating the use of the 'Cell Segmentation with Cellpose' node.DISCLAIMER:In order to use this workflow, you need to manually install the "KNIME Image Processing - PythonExtensions" available at kni.me/e/CjujPH_iaJn-CwNlThe author of this workflow is not affiliated with the authors of Cellpose, nor with KNIME. Please refer to theoriginal Cellpose paper for information about Cellpose, and to the image.sc forum for questions.Reference:Stringer, C., Wang, T., Michaelos, M. et al. Cellpose: a generalist algorithm for cellular segmentation. NatMethods 18, 100–106 (2021). https://doi.org/10.1038/s41592-020-01018-x Node 1Node 2Node 3 Cell Segmentationwith Cellpose Table Creator Image Reader(Table) Image Viewer

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Created by: eglijan
Created at: 2021-11-12
On NodePit since: 2021-11-22
Last update: 2024-04-28
Created with KNIME version: v4.3.4
Tags: cellposecell-segmentation

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