Icon

04_​SimilaritySearch

In this exercise we expand our results by finding building blocks similar to those we selected in the previous exercise (03_Clustering).

The catalog of building blocks is taken from : https://zinc15.docking.org/catalogs/enaminebbe/substances/

We will first calculate the fingerprints from the compounds and the building blocks. To ensure that the settings for this calculation are the same we will create and use a shared component. Then we perform a similarity search and end with a final selection and annotation step.







04_Similarity SearchIn this exercise we expand our results by finding similar building blocks for the interesting compounds found in the previous exercise. Node 45Node 49Node 50Node 51Node 52Node 60Node 65Node 66Node 67Node 69 Generatefingerprints Similarity Search Column Filter RDKit FunctionalGroup Filter RDKit Canon SMILES ReferenceRow Filter Generatefingerprints Renderer to Image Final selectionand annotation RDKit From Molecule Table Reader File Reader(Complex Format) Joiner 04_Similarity SearchIn this exercise we expand our results by finding similar building blocks for the interesting compounds found in the previous exercise. Node 45Node 49Node 50Node 51Node 52Node 60Node 65Node 66Node 67Node 69 Generatefingerprints Similarity Search Column Filter RDKit FunctionalGroup Filter RDKit Canon SMILES ReferenceRow Filter Generatefingerprints Renderer to Image Final selectionand annotation RDKit From Molecule Table Reader File Reader(Complex Format) Joiner

Nodes

Extensions

Links