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  • KNIME 5.11
    KNIME 55.115.105.95.8LTS5.75.65.5LTS5.45.35.25.15.0
    KNIME 44.74.64.54.44.34.24.14.0
    KNIME 33.73.6
    In Development5.12Nightly
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  6. RDKit Find Murcko ScaffoldsRDKit Find Murcko Scaffolds

RDKit Find Murcko Scaffolds

Generates the Murcko scaffold for an input RDKit Mol column and appends it to the table.

Input Ports

Icon
Data with RDKit Mol column

Output Ports

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Data with the Murcko scaffold column

Popular Predecessors

  • Row Splitter (deprecated)4 %
  • Loop End3 %
  • Joiner3 %
  • Table Creator2 %
  • Math Formula2 %
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Popular Successors

  • MarvinView3 %
  • RDKit Interactive Table3 %
  • Rule-based Row Filter2 %
  • RDKit Substructure Counter2 %
  • MolConverter2 %
  • Show all 146 recommendations

Views

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Workflows

  • Icon2026_0506_OpenADMET_PXR Blind_Challenge_Phase1_01_Exploratory_Data_AnalysisKNIME Hub
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  • Iconchin-a5-arndt-laufer-Extended2KNIME Hub
  • IconDrugRepurposingPipeline_OpenTargetsKNIME Hub
  • IconMolecular fragments recommendation systemNodePit Space
  • IconmTORKNIME Hub
  • IconR-group_decomposition_protocolKNIME Forum
  • IconSimilarity Search Between 2 Groups of MoleculesKNIME Hub
  • IconSimilarity Search Between 2 Groups of Molecules IIKNIME Forum
  • IconSPARFlowKNIME Hub
  • Icontext2strNodePit Space
  • Icontext2strKNIME Hub

Links

  • No links available

Developers

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Installation

To use this node in KNIME, install the extension RDKit Nodes Tests Feature from the below update site following our NodePit Product and Node Installation Guide:

v5.11
Plugin provider: Novartis
Plugin version: 5.2.1.v202602041042
On NodePit since: 2026-03-10
Last update: 2026-05-25
Tags: Streamable
KNIME versions: v5.11, v5.10, v5.9, v5.8, v5.7, v5.6, v5.5, v5.4, v5.3, v5.2, v5.1, v4.7, v4.6, v4.5, v4.4, v4.3, v4.2, v4.1, v4.0, v3.7, v3.6

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