This node is currently not available in KNIME v5.3 — instead we’re showing this page for KNIME v4.6. You can use the version menu in the title bar to permanently switch your preferred version. This will also show the link to the update site.

RegionOverlap

This Node Is Deprecated — This node is kept for backwards-compatibility, but the usage in new workflows is no longer recommended. The documentation below might contain more information.

A sample workflow that splits the table based on different chromosomes is provided as a test workflow.

Options

Start Table 1: Integer column with the start values of table 1
Stop Table 1: Integer column with the stop values of table 1
Start Table 2: Integer column with the start values of table 2
Stop Table 2: Integer column with the stop values of table 2

Input Ports

: regions of table 1
: regions of table 2

Output Ports

: Joined table

Views

This node has no views

Workflows

No workflows found

Developers

You want to see the source code for this node? Click the following button and we’ll use our super-powers to find it for you.

Installation

To use this node in KNIME, install the extension KNIME NGS tools from the below update site following our NodePit Product and Node Installation Guide:

v4.6

A zipped version of the software site can be downloaded here.

Plugin provider: Bernd Jagla, Institute Pasteur

Plugin version: 0.2.300.qualifier

On NodePit since: 2022-06-11

Last update: 2024-11-15

Tags: Deprecated

KNIME versions: From v3.6 to v4.6

Deploy, schedule, execute, and monitor your KNIME workflows locally, in the cloud or on-premises – with our brand new NodePit Runner.

Try NodePit Runner!