SpecLibCreator

Creates an MSP formatted spectral library.

Web Documentation for SpecLibCreator

Options

version
Version of the tool that generated this parameters file.
itemseperator
Separator between items. e.g. ,
itemenclosed
'true' or 'false' if true every item is enclosed e.g. '$peptide$,$run$...
log
Name of log file (created only when specified)
debug
Sets the debug level
threads
Sets the number of threads allowed to be used by the TOPP tool
no_progress
Disables progress logging to command line
force
Overrides tool-specific checks
test
Enables the test mode (needed for internal use only)

Input Ports

Icon
Holds id, peptide, retention time etc. [csv]
Icon
spectra [mzData,mzXML]

Output Ports

Icon
output MSP formatted spectra library [msp]

Views

SpecLibCreator Std Output
The text sent to standard out during the execution of SpecLibCreator.
SpecLibCreator Error Output
The text sent to standard error during the execution of SpecLibCreator. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

Workflows

  • No workflows found

Further Links

Developers

You want to see the source code for this node? Click the following button and we’ll use our super-powers to find it for you.