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FuzzyDiff

Generic Workflow Nodes for KNIME: OpenMS version 2.5.0.202002201806 by Freie Universitaet Berlin, Universitaet Tuebingen, and the OpenMS Team

Compares two files, tolerating numeric differences.

Web Documentation for FuzzyDiff

Options

version
Version of the tool that generated this parameters file.
ratio
acceptable relative error. Only one of 'ratio' or 'absdiff' has to be satisfied. Use "absdiff" to deal with cases like "zero vs. epsilon".
absdiff
acceptable absolute difference. Only one of 'ratio' or 'absdiff' has to be satisfied.
whitelist
Lines containing one of these strings are skipped
matched_whitelist
Lines where one file contains one string and the other file another string are skipped. Input is given as list of colon separated tuples, e.g. String1:String2 String3:String4
verbose
set verbose level: 0 = very quiet mode (absolutely no output) 1 = quiet mode (no output unless differences detected) 2 = default (include summary at end) 3 = continue after errors
tab_width
tabulator width, used for calculation of column numbers
first_column
number of first column, used for calculation of column numbers
log
Name of log file (created only when specified)
debug
Sets the debug level
threads
Sets the number of threads allowed to be used by the TOPP tool
no_progress
Disables progress logging to command line
force
Overwrite tool specific checks.
test
Enables the test mode (needed for internal use only)

Input Ports

Icon
first input file []
Icon
second input file []

Views

FuzzyDiff Std Output
The text sent to standard out during the execution of FuzzyDiff.
FuzzyDiff Error Output
The text sent to standard error during the execution of FuzzyDiff. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

Best Friends (Incoming)

Installation

To use this node in KNIME, install OpenMS from the following update site:

KNIME 4.2
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Developers

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