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BARD Assay Definitions

Retrieves information about BARD assay definitions.

BARD, the BioAssay Research Database (https://bard.nih.gov/) is a public database and suite of tools developed to provide access to bioassay data produced by the NIH Molecular Libraries Program (MLP).

Options

Get all assay definitions: Retrieves all available assay definitions.
Get assay definitions from ADID column: Retrieves assay definitions with ADIDs contained in the selected column.

Note: The IDs shown on the website are CAP (Catalog of Assay Protocols) IDs and not the BARD IDs needed here.

Input Ports

: Table containing the ADIDs.

Output Ports

: Table containing the assay definition metadata.

Note: List columns can be turned into separate rows using the Ungroup node.

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Installation

To use this node in KNIME, install the extension de.NBI - CIBI Extension from the below update site following our NodePit Product and Node Installation Guide:

v4.7

A zipped version of the software site can be downloaded here.

Plugin provider: Center for Integrative BioInformatics

Plugin version: 1.0.1.qualifier

On NodePit since: 2022-12-06

Last update: 2024-04-20

KNIME versions: From v3.6 to v4.7

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