SamTools

The SamTools node enables the access to several SAMtools utilities.
For more information, see the SAMtools help page

Options

Preference page

HTE

Set a threshold for repeated execution.Only used if HTE is enabled in the preference page.

Path to samtools

Set the path to the SAMtools executable (only if no inport is available)

Path to reference sequence

Set the path to the reference sequence (only if no inport is available)

Views

STDOUT / STDERR

The node offers a direct view of its standard out and the standard error of the tool.

Workflows

• KNIME4NGS_Test_VarCallingKnime4NGS

Links

• No links available

Developers