0 ×

Set PDB Name

Schrödinger extension for KNIME Workbench version by Schrödinger

This node uses MacroModel substructure definitions to set PDB atom and residue names for a structure. Note that as part of the assignment hydrogens are added to the structure since they are required for assigning PDB names.

Backend implementation

The script pdbname.py is used to implement this node.

Input Ports

Proteins in Maestro format

Output Ports

Proteins in Maestro format (with PDB names assigned)

Best Friends (Incoming)


You want to see the source code for this node? Click the following button and we’ll use our super-powers to find it for you.