Visualize, manipulate, and align multiple sequences and their properties,
and perform homology modeling with the aligned sequences. Opens the
Multiple Sequence Viewer panel. To send the selected (all if none selected) sequences back to KNIME, click on File->"Send Back to KNIME".
Column containing input
Column in the input data table in Maestro, Sequence, PDB, String or Text format
Output Column Structure
Choose the output columns:
Output only - Only Output structures
Run command for each input row
If this is checked, MultiSeq Viewer is started for each input row
MultiSequence Viewer command(s) to be executed
Flow variables can be specified in the command lines.
Ex: If "Command line(s)" has "%myvar1%" and if there exists a flow variable "myvar1" or "MultiSeq|myvar1", then its value will get substituted.
All flow variables starting with 'MultiSeq|' will be reset after the node gets executed, so that they wont be passed to the subsequent nodes.
set_font_size <font size in points, 8 to 24>,
set_display_boundaries <true> or <false>,
set_display_identity <true> or <false>,
set_display_similarity <true> or <false>,
set_display_homology <true> or <false> ,
set_display_score <true> or <false>,
set_wrapped <true> or <false> ,
set_ruler <true> or <false>
Note: 'send_to_knime' command writes the output without manual intervention.
Specifying 'send_to_knime' followed by 'quit', will write the output and returns to KNIME by exiting 'Multiple Sequence Viewer' panel. This is equivalent to "Send Back to KNIME" menu item.
Wait a sec! You want to explore and install nodes even faster? We highly recommend our
NodePit for KNIME
extension for your KNIME Analytics Platform.
Do you have feedback, questions, comments about NodePit, want to support this platform, or want your own nodes or workflows listed here as well?
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