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LCMS Introduction

Liquid chromatography-coupled mass-spectrometry introduction

Load mass spectra, process (e.g. filter) them "in-file", then convert them to tables, and visualize them.

This workflow demonstrates basic loading, processing, converting and visualizing mass-spectrometry experiments (in mzML format). For more information see the workflow metadata. Find it here: View -> Description If using own data, you canconfigure the node and set thepath. Example data is stored in theworkflow data path and referencedalready. Caution: The 3D Viewshould mainly be used forchecking filtered data orinteresting areas/excerpts. Load mzML some filteringof peaksto KNIME table3D ViewMISSING Input File MISSINGBaselineFilter MISSING FileToTable MISSING MSMap Viewer This workflow demonstrates basic loading, processing, converting and visualizing mass-spectrometry experiments (in mzML format). For more information see the workflow metadata. Find it here: View -> Description If using own data, you canconfigure the node and set thepath. Example data is stored in theworkflow data path and referencedalready. Caution: The 3D Viewshould mainly be used forchecking filtered data orinteresting areas/excerpts. Load mzML some filteringof peaksto KNIME table3D ViewMISSING Input File MISSINGBaselineFilter MISSING FileToTable MISSING MSMap Viewer

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Download

To use this workflow in KNIME, download it from the below URL and open it in KNIME:

Download Workflow
Created by: pfeuffer
Created at: 2021-03-22
On NodePit since: 2023-02-02
Last update: 2024-12-21
Created with KNIME version: v4.7.0
Tags: mass spectrometryOpenMSvisualizationintroduction

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