There are 5185 nodes that can be used as predessesor
for a node with an input port of type Generic Port.
KNIME node to retrieve the different interaction types that are encoded for each pocket residue in the interaction fingerprint.
KNIME node to retrieve a list of all co-crystallized ligands (optionally for a given set of kinase IDs) from KLIFS.
KNIME node to retrieve a list of structure IDs from KLIFS of structures in complex with specific kinases (kinase IDs) or ligands (ligand IDs).
KNIME node to map a set of 4-letter PDB-codes to structure IDs from KLIFS.
KNIME node to retrieve (a part of) a kinase-ligand complex as a 3D structure in MOL2/PDB format from KLIFS.
Find Kripo fragment information by their identifier.
Retrieve Kripo pharmacophores.
Find similar fragments to queries based on the Kripo fingerprint similarity matrix.
Node to view ligands and proteins
Node to view ligands in 3D
Do you have feedback, questions, comments about NodePit, want to support this platform, or want your own nodes or workflows listed here as well? Do you think, the search results could be improved or something is missing? Then please get in touch! Alternatively, you can send us an email to mail@nodepit.com.
Please note that this is only about NodePit. We do not provide general support for KNIME — please use the KNIME forums instead.