Node Connectivity

There are 195 nodes that can be used as successor for a node with an output port of type FileStoreReferenceURIPort.

OpenSwathChromatogramExtractor 

Extract chromatograms (XIC) from a MS2 map file.

OpenSwathConfidenceScoring 

Compute confidence scores for OpenSwath results

OpenSwathDIAPreScoring 

Scoring spectra using the DIA scores.

OpenSwathDecoyGenerator 

Generates decoys according to different models for a specific TraML

OpenSwathFeatureXMLToTSV 

Converts a featureXML to a mProphet tsv.

OpenSwathFileSplitter 

Splits SWATH files into n files, each containing one window.

OpenSwathRTNormalizer 

Generate a transformation file on how to transform the RT space into the normalized space given a description of RT peptides and their normalized retention […]

OpenSwathRewriteToFeatureXML 

Combines featureXML and mProphet tsv to FDR filtered featureXML.

OpenSwathWorkflow 

Complete workflow to run OpenSWATH

FLASHDeconv 

Ultra-fast high-quality deconvolution enables online processing of top-down MS data