RDKit Molecule Fragmenter

Fragments a set of RDKit molecules into subgraphs

Options

RDKit Mol column: The column containing the molecules
Min Path Length: The minimum size (in bonds) of the subgraphs to be included.
Max Path Length: The maximum size (in bonds) of the subgraphs to be included.

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To use this node in KNIME, install the extension RDKit Nodes Tests Feature from the below update site following our NodePit Product and Node Installation Guide:

v5.4

A zipped version of the software site can be downloaded here.

Plugin provider: Novartis

Plugin version: 5.2.0.v202411222130

On NodePit since: 2024-12-06

Last update: 2024-12-17

KNIME versions: v5.4, v5.3, v5.2, v5.1, v4.7, v4.6, v4.5, v4.4, v4.3, v4.2, v4.1, v4.0, v3.7, v3.6

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