Labeling to RGB Img

Converts a labeling to an image with an additional Channel-dimension containing the color information. It is, for instance, useful to write a colored labeling to an image file. Optionally the labeling can be blended with a background image of the same size.

Options

Image overlay

Allows to choose a background image that is blended with the labeling. The image must have the same number of dimension and be of the same size as the labelings. DoubleType is currently not supported.

Transparency of labels

Adjust the label transparency value between 0 and 255 where 255 means the labels are completely opaque.

Column Selection

Column Creation Mode

Mode how to handle the selected column. The processed column can be added to a new table, appended to the end of the table, or the old column can be replaced by the new result

Column Suffix

A suffix appended to the column name. If "Append" is not selected, it can be left empty.

Column Selection

Selection of the columns to be processed.

Views

Image Viewer

Another, possibly interactive, view on table cells. Displays the selected cells with their associated viewer if it exists. Available views are:
- Histogram Viewer
-- This viewer shows the histogram of the currently selected image.
- Missing Value Viewer
-- An empty viewer that is shown when the input cell has no value to display.
- Image Viewer
-- This viewer renders the selected image-cell.
- Combined View
-- A viewer shown when the user selects an interval of rows and columns in the viewer. This viewer combines all images and labelings in the selected interval to one image by rendering them next to each other. Alternatively, the images and labelings can be layed over each other.
- BigDataViewer
-- A viewer shown when the user selects an interval of rows and columns in the viewer. This viewer combines all images and labelings in the selected interval to one image by rendering them next to each other. Alternatively, the images and labelings can be layed over each other.
- XML
-- XML tree
- Labeling View
-- View on a labeling/segmentation

Workflows

• 01_Overlay_RGBKNIME Hub
• 03_WebPortal_PredictionsKNIME Hub
• 03_WebPortal_PredictionsKNIME Hub
• Akhtar_et_al_Bacterial_FISH_Example_WorkflowKNIME Hub
• JKISeason2-21_sryuKNIME Hub
• Show all 10 workflows

Links

• No links available

Developers