Logistic (3.7)

Class for building and using a multinomial logistic regression model with a ridge estimator. There are some modifications, however, compared to the paper of leCessie and van Houwelingen(1992): If there are k classes for n instances with m attributes, the parameter matrix B to be calculated will be an m*(k-1) matrix. The probability for class j with the exception of the last class is Pj(Xi) = exp(XiBj)/((sum[j=1..(k-1)]exp(Xi*Bj))+1) The last class has probability 1-(sum[j=1..(k-1)]Pj(Xi)) = 1/((sum[j=1..(k-1)]exp(Xi*Bj))+1) The (negative) multinomial log-likelihood is thus: L = -sum[i=1..n]{ sum[j=1..(k-1)](Yij * ln(Pj(Xi))) +(1 - (sum[j=1..(k-1)]Yij)) * ln(1 - sum[j=1..(k-1)]Pj(Xi)) } + ridge * (B^2) In order to find the matrix B for which L is minimised, a Quasi-Newton Method is used to search for the optimized values of the m*(k-1) variables

Note that before we use the optimization procedure, we 'squeeze' the matrix B into a m*(k-1) vector.For details of the optimization procedure, please check weka.core.Optimization class.

Although original Logistic Regression does not deal with instance weights, we modify the algorithm a little bit to handle the instance weights.

For more information see:

le Cessie, S., van Houwelingen, J.C.

(1992).Ridge Estimators in Logistic Regression.

Applied Statistics.41(1):191-201.

Note: Missing values are replaced using a ReplaceMissingValuesFilter, and nominal attributes are transformed into numeric attributes using a NominalToBinaryFilter.

(based on WEKA 3.7)

For further options, click the 'More' - button in the dialog.

All weka dialogs have a panel where you can specify classifier-specific parameters.

Options

Logistic Options

D: Turn on debugging output.

C: Use conjugate gradient descent rather than BFGS updates.

R: Set the ridge in the log-likelihood.

M: Set the maximum number of iterations (default -1, until convergence).

Select target column

Choose the column that contains the target variable.

Preliminary Attribute Check

The Preliminary Attribute Check tests the underlying classifier against the DataTable specification at the inport of the node. Columns that are compatible with the classifier are marked with a green 'ok'. Columns which are potentially not compatible are assigned a red error message.

Important: If a column is marked as 'incompatible', it does not necessarily mean that the classifier cannot be executed! Sometimes, the error message 'Cannot handle String class' simply means that no nominal values are available (yet). This may change during execution of the predecessor nodes.

Capabilities: [Nominal attributes, Binary attributes, Unary attributes, Empty nominal attributes, Numeric attributes, Date attributes, Missing values, Nominal class, Binary class, Missing class values] Dependencies: [] min # Instance: 1

Command line options

It shows the command line options according to the current classifier configuration and mainly serves to support the node's configuration via flow variables.

Additional Options

Select optional vector column: If the input table contains vector columns (e.g. double vector), the one to use can be selected here. This vector column will be used as attributes only and all other columns, except the target column, will be ignored.
Keep training instances: If checked, all training instances will be kept and stored with the classifier model. It is useful to calculate additional evaluation measures (see Weka Predictor) that make use of class prior probabilities. If no evaluation is performed or those measures are not required, it is advisable to NOT keep the training instances.

Input Ports

: Training data

Output Ports

: Trained model

Popular Predecessors

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Views

Weka Node View: Each Weka node provides a summary view that provides information about the classification. If the test data contains a class column, an evaluation is generated.

Workflows

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Developers

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Installation

To use this node in KNIME, install the extension KNIME Weka Data Mining Integration (3.7) from the below update site following our NodePit Product and Node Installation Guide:

v5.2

A zipped version of the software site can be downloaded here.

Plugin provider: KNIME AG, Zurich, Switzerland

Plugin version: 5.2.0.v202310301556

On NodePit since: 2023-12-06

Last update: 2024-04-18

KNIME versions: Since v3.6

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