Given a FASTA file with fragments, simulate sequencing thereof.
This program is a more lightweight version of mason_sequencing without support for the application of VCF and fragment sampling. Output of SAM is also not available. However, it uses the same code for the simulation of the reads as the more powerful mason_simulator.
You can use mason_frag_sequencing if you want to implement you rown fragmentation behaviour, e.g. if you have implemented your own bias models.
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To use this node in KNIME, install the extension SeqAn from the below update site following our NodePit Product and Node Installation Guide:
A zipped version of the software site can be downloaded here.
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