MasaiIndexer

Masai is a fast and accurate read mapper based on approximate seeds and multiple backtracking.

See http://www.seqan.de/projects/masai for more information.

(c) Copyright 2011-2012 by Enrico Siragusa.

Web Documentation for MasaiIndexer

Options

index
Select the genome index type.
index-prefix
Specify an genome index prefix name. Default: use the genome filename prefix.
tmp-folder
Specify a huge temporary folder. Default: use the genome folder.

Input Ports

Icon
[fasta,fa]

Output Ports

This node has no output ports

Popular Predecessors

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Popular Successors

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Views

MasaiIndexer Std Output
The text sent to standard out during the execution of MasaiIndexer.
MasaiIndexer Error Output
The text sent to standard error during the execution of MasaiIndexer. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

Workflows

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Links

Developers

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