Fiona is a tool for the correction of NGS read data sets. It uses a novel statistical approach for high quality and state-of-the art data structures for low resource consumptions and features a good parallelization.
You have to specify the approximate genome length of the donor in GENOME_LEN. The reads are read from the file IN.{fq,fa} and are written to OUT.fa.
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To use this node in KNIME, install the extension SeqAn from the below update site following our NodePit Product and Node Installation Guide:
A zipped version of the software site can be downloaded here.
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