IconMapStatistics0 ×

Generic Workflow Nodes for KNIME: OpenMS version 2.3.0.201712211252 by Freie Universitaet Berlin, Universitaet Tuebingen, and the OpenMS Team

Extract extended statistics on the features of a map for quality control.

Web Documentation for MapStatistics

Options

version
Version of the tool that generated this parameters file.
in_type
Input file type -- default: determined from file extension or content
n
Report separate statistics for each of n RT slices of the map.
m
Show meta information about the whole experiment
p
Shows data processing information
s
Computes a summary statistics of intensities, qualities, and widths
log
Name of log file (created only when specified)
debug
Sets the debug level
threads
Sets the number of threads allowed to be used by the TOPP tool
no_progress
Disables progress logging to command line
force
Overwrite tool specific checks.
test
Enables the test mode (needed for internal use only)

Input Ports

Input file [featureXML,consensusXML]

Output Ports

Optional output txt file. If empty, the output is written to the command line. [txt,Inactive]

Views

MapStatistics Std Output
The text sent to standard out during the execution of MapStatistics.
MapStatistics Error Output
The text sent to standard error during the execution of MapStatistics. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

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Update Site

To use this node in KNIME, install Generic Workflow Nodes for KNIME: OpenMS from the following update site:

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