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Enrichment Analyzer

HCS-Tools for KNIME version 4.0.0.v202007151505 by Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG)

Tests for enrichment of a set of observation was enriched with certain ontoloy-classes. The analysis takes two arguments as inputs. First, a grouping colum that defines the groups of interest. Observations can belong to several groups, which are separated by semicolon. Second, ontology-term column that defines the classes for which enrichment should be tested.

Options

Interest groups
A grouping colum that defines the groups of interest. Observations can belong to several groups, which are separated by semicolon. In the simplest case this class just denotes hits as hits, and doesn't contain any value for the non-hits.
Ontology terms
An ontology-term column that defines the classes for which enrichment should be tested. Different terms need to be separated by semicolon.

Input Ports

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Input screen to be EA'ed

Output Ports

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New table that contains p-Values for each group (rows) and each ontology-class.

Best Friends (Incoming)

Best Friends (Outgoing)

Installation

To use this node in KNIME, install KNIME HCS Tools from the following update site:

KNIME 4.3

A zipped version of the software site can be downloaded here.

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Developers

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