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StarStatisticMerger

IBIS Helmholtz-Node extension for KNIME Workbench version 1.8.1.201707071203 by IBIS KNIME Team

The StarStatisticMerger can be used to merge the mapping statistics (Log.final.out) of multiple STAR runs into one file in order to post-process that data.

Options

Path to folder with STAR Outputs
The node searches recursively all folders and sub-folders of the input directory for output files of a STAR run.
Path to output folder
Set the path to a folder where the output files, name after the selected module, shoul dbe stored.
Modules to merge
Select whether mapping statistics should be used for merging.

Output Ports

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Cell 0: Name of the module
Cell 1: Path to the merged file
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Cell 0: Path to the STAR output files which were merged

Installation

To use this node in KNIME, install KNIME4NGS from the following update site:

KNIME 4.3

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Developers

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