StarStatisticMerger

The StarStatisticMerger can be used to merge the mapping statistics (Log.final.out) of multiple STAR runs into one file in order to post-process that data.

Options

Path to folder with STAR Outputs: The node searches recursively all folders and sub-folders of the input directory for output files of a STAR run.
Path to output folder: Set the path to a folder where the output files, name after the selected module, shoul dbe stored.
Modules to merge: Select whether mapping statistics should be used for merging.

Input Ports

This node has no input ports

Output Ports

: Cell 0: Name of the module
Cell 1: Path to the merged file
: Cell 0: Path to the STAR output files which were merged

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Installation

To use this node in KNIME, install the extension KNIME4NGS from the below update site following our NodePit Product and Node Installation Guide:

v5.3

Plugin provider: IBIS KNIME Team

Plugin version: 1.8.1.201707071203

On NodePit since: 2024-07-09

Last update: 2024-11-21

KNIME versions: Since v3.6

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