StarStatisticMerger

The StarStatisticMerger can be used to merge the mapping statistics (Log.final.out) of multiple STAR runs into one file in order to post-process that data.

Options

Path to folder with STAR Outputs
The node searches recursively all folders and sub-folders of the input directory for output files of a STAR run.
Path to output folder
Set the path to a folder where the output files, name after the selected module, shoul dbe stored.
Modules to merge
Select whether mapping statistics should be used for merging.

Input Ports

This node has no input ports

Output Ports

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Cell 0: Name of the module
Cell 1: Path to the merged file
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Cell 0: Path to the STAR output files which were merged

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Installation

To use this node in KNIME, install the extension KNIME4NGS from the below update site following our NodePit Product and Node Installation Guide:

v5.4
Plugin provider: IBIS KNIME Team
Plugin version: 1.8.1.201707071203
On NodePit since: 2024-12-06
Last update: 2024-12-21
KNIME versions: Since v3.6

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