This node is currently not available in KNIME v5.9 — instead we’re showing this page for KNIME v5.7. You can use the version menu in the title bar to permanently switch your preferred version. This will also show the link to the update site.

PoseViewer-to-Complexes

A Pose Viewer contain a receptor as the first structure and a set of ligands. PoseViewer-to-Complexes can be used to generate individual receptor/ligand pairs from a pose viewer file.

Backend implementation

scripts/pv_to_complexes.py
The script pv_to_complexes.py is used to convert the Pose Viewer input to the Complexes output

Options

Output Column Structure

Choose the output columns:

Input plus Output - The input columns are included in the output.

Output replaced within Input columns - The output columns are the same as the input, with the output structures replacing the input column selected

Output only - Only Output structures

Input Ports

: Pose viewer in Maestro format

Output Ports

: Receptor/ligand complexes in Maestro format

Popular Predecessors

Popular Successors

Views

This node has no views

Workflows

Developers

You want to see the source code for this node? Click the following button and we’ll use our super-powers to find it for you.

Installation

To use this node in KNIME, install the extension Schrödinger Extensions for KNIME from the below update site following our NodePit Product and Node Installation Guide:

v5.7

A zipped version of the software site can be downloaded here.

Plugin provider: Schrödinger

Plugin version: 25.2.133.v202505021925

On NodePit since: 2025-12-25

Last update: 2025-12-25

KNIME versions: v5.7, v5.6, v5.5, v5.4, v5.3, v5.2, v5.1, v4.7, v4.6, v4.5, v4.4, v4.3, v4.2, v4.1, v4.0, v3.7, v3.6

Deploy, schedule, execute, and monitor your KNIME workflows locally, in the cloud or on-premises – with our brand new NodePit Runner.

Try NodePit Runner!