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Postmortem

Schrödinger extension for KNIME Workbench version 21.1.156.202102141445 by Schrödinger

This program archives information that's useful for understanding why jobs don't run as expected. It creates a zip archive containing the current environment, a list of installed Schrodinger software packages, the schrodinger.hosts file, the queues/ support scripts and the license file. If jobids are specified, the job record(s) for those jobs are archived, along any related files (batch scripts, qlog files, etc) from the jobdb.

Backend implementation

$SCHRODINGER/utilities/postmortem

Options

Exclude structures
Do not include structure files in the zipped archive
Hide directory names when reporting files
Automatically replace strings that may contain sensitive information
Other args
Specify any additional postmortem options
Run postmortem for each row
Run postmortem utility for each row. If it is OFF(default value is OFF), then only one postmortem output file will be generated for all the input jobids.

Input Ports

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Zipfile

Output Ports

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Output of postmortem

Best Friends (Incoming)

Best Friends (Outgoing)

Workflows

Installation

To use this node in KNIME, install Schrödinger Extensions for KNIME from the following update site:

KNIME 4.3

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Developers

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