Postmortem

This program archives information that's useful for understanding why jobs don't run as expected. It creates a zip archive containing the current environment, a list of installed Schrodinger software packages, the schrodinger.hosts file, the queues/ support scripts and the license file. If jobids are specified, the job record(s) for those jobs are archived, along any related files (batch scripts, qlog files, etc) from the jobdb.

Backend implementation

$SCHRODINGER/utilities/postmortem for Jobcontrol jobids
$SCHRODINGER/jsc postmortem for Jobserver jobids

Options

Hide sensitive information: Automatically replace strings that may contain sensitive information
Other args: Specify any additional postmortem options
Run postmortem for each row: Run postmortem utility for each row. If it is OFF(default value is OFF), then only one postmortem output file will be generated for all the input jobids. This is applicable only for Jobcontrol jobids. For Jobserver jobids, individual postmortem files are generated always.

Input Ports

: Postmortem file (.zip)

Output Ports

: Output of postmortem

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Installation

To use this node in KNIME, install the extension Schrödinger Extensions for KNIME from the below update site following our NodePit Product and Node Installation Guide:

v5.2

A zipped version of the software site can be downloaded here.

Plugin provider: Schrödinger

Plugin version: 24.1.135.v202402072122

On NodePit since: 2023-12-06

Last update: 2024-04-22

KNIME versions: v5.2, v5.1, v4.7, v4.6, v4.5, v4.4, v4.3, v4.2, v4.1, v4.0, v3.7, v3.6

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