The PDB Reader node loads molecules from Protein Data Bank files (PDB), macromolecule Cryptographic Information Format (mmCIF), Macromolecular Transmission Format (mmTF) files or directly via the four-letter code (PDB ID) from RCSB for subsequent processing.
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- Structure-based Pharmacophore Creator7 %
- Active-Site Ligand Extractor6 %
- AutoDock 46 %
- MD Pharmacophore Creator5 %
- 3D Viewer5 %
- AutoDock Vina4 %
- Ligand-based Pharmacophore Creator4 %
- PDB Writer4 %
- MMFF94 Minimizer4 %
- OpenBabel4 %
- Pharmacophore/Molecule Alignment4 %
- Activity Profiling3 %
- Auto-Binner3 %
- GroupBy3 %
- Mol Writer2 %
- Mol2 Writer2 %
- PDB Property Extractor2 %
- ICon< 1 %
- PML/PMZ Pharmacophore Writer< 1 %
- SDF Writer< 1 %
- IScreen< 1 %
- PDB Loader< 1 %
- PDB Sequence Extractor< 1 %
- RCSB PdbImporter< 1 %
MarvinSpace< 1 %- Create Bit Vector< 1 %
Row Splitter (deprecated)< 1 %Row Filter (deprecated)< 1 %- Interactive Table (legacy)< 1 %
- SDF Extractor< 1 %
- 3D RMSD< 1 %
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