This workflow was built with KNIME Analytics Platform 4.0.2, however, similar workflows have been used with KNIME Analytics Platform 3.5 to 4.1 as well.
The sample images and pixel classification model are packaged with this workflow already, but can also be downloaded from https://doi.org/10.6084/m9.figshare.9936287.v2.
Instructions to follow before opening the workflow:
1) Follow instructions at https://knime.com/community/imagej to install the KNIME Image Processing - ImageJ Extension
2) Follow instructions at https://knime.com/wiki/knime-image-processing-nightly-build to add and activate the nightly software site of KNIME Image Processing
3) Go to File > Preferences > KNIME > Image Processing Plugin and add ",F" to the available dimension labels and restart KNIME Analytics Platform
4) Open the workflow and follow instructions to search and install missing extensions
To use this workflow in KNIME, download it from the below URL and open it in KNIME:Download Workflow
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