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09_​Geo_​phylogenetic_​analysis_​Zika

Interactive visualization of epidemological data from zika virus
Interactive visualization of epidemological data from zika virusThis workflow illustrates how to interactively explore geolocation as well as phylogenetic data with KNIME AP. It is inspired by the microreactproject “Zika virus in the Americas”: (https://microreact.org/project/zika-virus). The data (temporal and spatial data in .csv format andphylogenetic tree in Newick format) is investigated using a composite interactive view. For that, custom JS nodes have been developed.Geolocation data is visualized in a map that integrates Leaflet.js library and the tree node is built with pure d3.js based on this code: https://github.com/jasondavies/newick.js. Both generiic JavaScript views support basic KNIME interactivity like filtering or selection and work togetherwith a Range Slider and Table View nodes to complete the analysis. Map + table(needs wifi)add unknown ifgeo info is missingtree in Newick formattemporal and spatialdata Interactive view Color Manager Missing Value File Reader File Reader Interactive visualization of epidemological data from zika virusThis workflow illustrates how to interactively explore geolocation as well as phylogenetic data with KNIME AP. It is inspired by the microreactproject “Zika virus in the Americas”: (https://microreact.org/project/zika-virus). The data (temporal and spatial data in .csv format andphylogenetic tree in Newick format) is investigated using a composite interactive view. For that, custom JS nodes have been developed.Geolocation data is visualized in a map that integrates Leaflet.js library and the tree node is built with pure d3.js based on this code: https://github.com/jasondavies/newick.js. Both generiic JavaScript views support basic KNIME interactivity like filtering or selection and work togetherwith a Range Slider and Table View nodes to complete the analysis. Map + table(needs wifi)add unknown ifgeo info is missingtree in Newick formattemporal and spatialdataInteractive view Color Manager Missing Value File Reader File Reader

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Created by: Oleg Yasnev
Created at: 2018-04-25
On NodePit since: 2019-07-26
Last update: 2024-04-27
Created with KNIME version: v3.7.1
Tags: Composite interactive viewVisual analysisEpidemiological dataGeneric JavaScript viewGeolocationPhylogenyData explorationbiology

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